ISCB Congratulates the 2019 Class of Fellows!

The ISCB Fellows program was created to honor members who have distinguished themselves through outstanding contributions to the fields of computational biology and bioinformatics. During the 2009 inaugural year of the program, the ISCB Board of Directors unanimously conferred Fellows status on the seven winners-to-date of the ISCB Accomplishment by a Senior Scientist Award. 2019 marks the 10th anniversary of the program. Each year since 2010, ISCB has sought Fellows nominations from our members, with eligibility restrictions based on selection criteria focused most heavily on the significance of scientific contributions, and service to our field and to ISCB.

We were pleased to receive many excellent nominations this year, and the Fellows Selection Committee members carefully considered each one. Ultimately, four nominees were elected as this year's newest Fellows.

Vineet Bafna, Professor, Computer Science and Engineering, University of California, San Diego, United States, an innovator who developed many bioinformatics algorithms for solving important biological problems and a leading researcher in the area of Cancer Genomics, Population Genetics, and Proteogenomics. His research is marked by deep insights into fundamental problems that were ignored by others.

Eleazar Eskin, Professor, Computer Science, Human Genetics, University of California, Los Angeles, United States, a leading computer scientist working in computational problems in human genetics, especially in terms of human disease. He has developed advanced educational programs for computer scientists, biologists, and statisticians, in computational biology, especially through his leadership activities at the NSF Center for Pure and Applied Mathematics (IPAM) at UCLA.

Xiaole Shirley Liu, Professor, Biostatistics, Harvard T.H. Chan School Of Public Health, Harvard School of Public Health; Co-director, Center for Functional Cancer Epigenetics, Dana-Farber Cancer Institute, United States, an innovative and prolific computational cancer biologist. Her research focuses on algorithm development and integrative modeling of high throughput data to understand the specificity and function of regulator genes in tumor development, progression, drug response and resistance, resulting in many highly cited papers.

Marie-France Sagot, Director of Research (DR1) INRIA, Head of Erable-BAOBAB Teams, INRIA Grenoble Rhône-Alpes & Laboratoire de Biométrie et Biologie Évolutive (LBBE), Université Claude Bernard, Universite Claude Bernard, France, a key figure linking the South-American and European bioinformatics communities. She is best known for her sharp algorithmic work. Specifically, her work on exact algorithms for structured or approximate motif search using suffix trees was foundational in the analysis of transcriptional regulatory sequences.



Congratulations, 2019 Class of ISCB Fellows!

ISCB Congratulates the 2019 ISCB Award Winners!

Barbara Bryant, Christophe Dessimoz, William Noble, Bonnie Berger


The International Society of Computational Biology (ISCB) is pleased to announce the winners of the 2019 Accomplishments by a Senior Scientist Award, Overton Prize, Innovator Award, and Outstanding Contributions to ISCB Award. “With awards, ISCB recognizes scientists in our field who are beacons at the junior, mid-term and senior career stage and scientists who have shown extraordinary commitment to our society,” said ISCB President, Thomas Lengauer. “Our awards committee under the leadership of Ron Shamir has thoughtfully and in an established process selected this year's awardees and has come up with a very impressive slate. I congratulate all award winners for their achievements and the awards committee for doing a fabulous job.”

Bonnie Berger, MIT, is the winner of the Accomplishments by a Senior Scientist Award. Christophe Dessimoz, University of Lausanne, University College London, and Swiss Institute of Bioinformatics is the Overton Prize winner. William Stafford Noble, University of Washington, is the winner of the ISCB Innovator Award. Barbara Bryant, Constellation Pharmaceuticals, has been selected as the winner of the Outstanding Contributions to ISCB Award.


Bonnie Berger, Simons Professor of Mathematics and Professor of Electrical Engineering & Computer, Massachusetts Institute of Technology, United States

Recipient of ISCB Accomplishments by a Senior Scientist Award

The ISCB Accomplishments by a Senior Scientist Award recognizes leaders in the fields of computational biology and bioinformatics for their significant research, education, and service contributions. Bonnie Berger is being honored as the 2019 winner of the ISCB Accomplishments by a Senior Scientist Award.

Professor Bonnie Berger is the Simons Professor of Mathematics with a joint appointment in Computer Science, and Associate Member of the Broad Institute at Massachusetts Institute of Technology (MIT), Cambridge, MA, United States. She is also Faculty of Harvard and MIT Health, Science and Technology. She received her Ph.D from MIT in 1990 in computer science and completed a postdoctoral fellowship in applied mathematics in 1992.

After beginning her career working in algorithms at MIT, she was one of the pioneer researchers in computational biology and, together with the many students she has mentored, has been instrumental in defining the field. She continues to lead efforts to design algorithms to gain biological insights from recent advances in automated data collection and the subsequent large data sets drawn from them. Dr. Berger works on diverse areas, including Compressive Genomics, Network Inference, Structural Bioinformatics, Population Genomics, and Genomic Privacy.

She has co-authored over 185 scholarly research articles and has been invited to present at conferences in fields ranging from randomized algorithms and graph theory to computational Molecular Biology. Dr. Berger was recently elected to serve as a Member-at-Large of the Section on Mathematics at American Association for the Advancement of Science (AAAS). Over the years, she has received numerous honors including: election to the American Academy of Arts and Sciences, the NIH Margaret Pittman Director’s Award for Outstanding Scientific Achievement & Lectureship, Biophysical Society's Dayhoff Award, Technology Review Magazine's inaugural TR100 as a top young innovator, ACM Fellow, ISCB Fellow, American Institute for Medical and Biological Engineering Fellow, American Mathematical Society Fellow, NSF Career Award and Honorary Doctorate from EPFL.

Christophe Dessimoz, SNSF Professor, University of Lausanne; Associate Professor, University College London; Group Leader, Swiss Institute of Bioinformatics

Recipient of the ISCB Overton Prize

The Overton Prize recognizes the research, education, and service accomplishments of early to mid-career scientists who are emerging leaders in computational biology and bioinformatics. The Overton Prize was instituted in 2001 to honor the untimely loss of G. Christian Overton, a leading bioinformatics researcher and a founding member of the ISCB Board of Directors. Christophe Dessimoz is being recognized as the 2019 winner of the Overton Prize.
 
Christophe Dessimoz is a SNSF Professor at the University of Lausanne; an Associate Professor at the University College London; a Group Leader at the Swiss Institute for Bioinformatics. Christophe obtained his Master in Biology (2003) and PhD in Computer Science (2009) from ETH Zurich, Switzerland. After a postdoc at the European Bioinformatics Institute near Cambridge (UK), he joined University College London as Lecturer (2013) and was promoted to a Reader in 2015. He joined the University of Lausanne as a SNSF Professor in 2015. With 70 papers published, Christophe has made varied and sustained contributions to bioinformatics.

He is renowned for his contributions to and subsequently management of the OMA resource providing high quality information on orthologous proteins. OMA is a very highly regarded resource with important applications in protein function prediction.

Another important thread across Christophe’s work has been his pursuit of benchmarking. Christophe’s rigorous approach to benchmarking had a major impact on three key subfields of computational biology: orthology inference, sequence alignment, and gene ontology.

William Stafford Noble, Professor, Department of Genome Sciences, Department of Computer Science and Engineering, Director, Computational Molecular Biology Program, University of Washington, United States

Recipient of the ISCB Innovator Award

The year 2016 marked the launch of the ISCB Innovator Award, which is given to a leading scientist who is within two decades of receiving the PhD degree, has consistently made outstanding contributions to the field, and continues to forge new directions. William Stafford Noble is the 2019 winner of the ISCB Innovator Award.
 
Dr. Noble is a Professor in the Department of Genome Sciences and in the Paul G. Allen School of Computer Science and Engineering at the University of Washington, United States. He received the Ph.D. in computer science and cognitive science from University of California, San Diego in 1998. After a one-year postdoc with David Haussler at University of California, Santa Cruz, he became an Assistant Professor in the Department of Computer Science at Columbia University. In 2002, he joined the faculty of the Department of Genome Sciences at the University of Washington where he now is a Professor and the Director of the Computational Molecular Biology Program.
 
Noble's research applies statistical and machine learning methods to the analysis of complex biological data sets. He has extensive experience developing novel analytical methods, creating user-friendly software implementing those methods, and collaborating with experimentalists.  The most notable areas of research for Noble and his group are sequence analysis methods for DNA and proteins, kernel methods for learning from heterogeneous data, semi-automated genome annotation, the 3D structure of the genome and machine learning and statistical methods for analyzing shotgun proteomics data.

He is the author of >230 peer reviewed publications and has advised 27 postdoctoral fellows and 24 graduate students. William is the recipient of an NSF CAREER award, is a Sloan Research Fellow, is on the Clarivate Analytics list of “Highly cited researchers,” and is a Fellow and former member of the Board of Directors of the International Society for Computational Biology.

Barbara Bryant, Senior Director, Constellation Pharmaceuticals

Recipient of the ISCB Outstanding Contributions Award

The Outstanding Contributions to ISCB Award recognizes an ISCB member for her or his outstanding service contributions toward the betterment of ISCB through exemplary leadership, education, and service. The 2019 recipient of the Outstanding Contributions to ISCB Award is Barbara Bryant.
 
Barbara Bryant is the Senior Director for Bioinformatics at Constellation Pharmaceuticals.  A computational biologist with over 20 years of industry experience, Barbara designs and builds data analysis systems, and provides bioinformatics services.  
 
Barbara is being recognized for her significant contributions to ISCB.  During the early years of ISCB, she held the officer positions of Secretary and Vice President and remained as a member of the Board of Directors until 2008.  She helped to shape the Society in the early years, including crafting the advocacy section of the first ISCB strategic plan in 2003. That led to the development of a Public Affairs and Policy committee, which she later chaired. She served as the ISCB representative on the FASEB Board of Directors from 2003 to 2007, and continued as alternate Board Member until 2011. At FASEB, she served on the Science Policy Committee, and advocated on Capitol Hill for funding for basic scientific research. Becoming aware of anecdotal evidence of problems scientists were facing to obtain visas to come to the USA for conferences and research collaborations, she conducted a survey of ISCB members. The results were shared with the National Academy of Sciences in preparation for a 2008 Senate hearing on the topic of barriers to scientific exchange. Barbara then authored an article about the importance of open scholarly travel for collaboration, with recommendations for scientific societies. She along with others wrote the ISCB software sharing policy, which was approved by the Board of Directors in 2008 and remains an important policy statement of the Society today. In 2005 Barbara joined the editorial board of the Public Library of Science Computational Biology journal, rising to Deputy Editor in Chief. She served on the ISMB committees in 2010 and 2012. Barbara organized the orienteering ice-breaker at ISMB conferences for many years, including in San Diego, Copenhagen, Edmonton, Brisbane, Glasgow, Detroit, Toronto, Vienna, Stockholm, and Boston.


ISCB will present the Accomplishments by a Senior Scientist Award, Overton Prize, Innovator Award and Outstanding Contributions to ISCB Award, at ISMB/ECCB 2019 (www.iscb.org/ismbeccb2019), which is being held in Basel, Switzerland, July 21-25. Dessimoz, Noble, and Berger will present keynote addresses during the conference.
 
Full bibliographical articles profiling the award recipients will be available in the ISMB/ECCB 2019 focus issue of the ISCB newsletter later this year, as well as the ISCB Society Pages in OUP Bioinformatics, and F1000 Research ISCB Community Journal.

ISMB/ECCB 2019
Call for Submissions!

ISMB/ECCB invites abstracts for research that is topical to bioinformatics and computational biology, which is in progress (unpublished, formally Late-Breaking Research) or has been published after January 1, 2018 (previously Highlights Track) for consideration for oral and/or poster presentation.

Communities of Special Interest Track:

• 3DSIG • Bio-Ontologies • BioVis • BOSC: Bioinformatics Open Source Conference • CAMDA • CompMS • Education • Evolution and Comparative Genomics • Function • HitSeq • MLCSB • MICROBIOME • NetBio • RegSys • RNA •
SysMod • Text Mining • TransMed • VarI • General Computational Biology

Can’t find your home COSI? ISCB welcomes submissions for all research in computational biology and bioinformatics. Simply submit to the general computational biology track above for oral and poster presentation consideration.

The Technology Track allows organizations to showcase their software and/or hardware relevant to the bioinformatics / molecular biology community. Demonstrate your technology to a renowned audience at the premier comp bio conference of the year!

Prior to submitting please review the ISCB Exhibitor and Technology Track guidelines for presentations available here.

ISMB/ECCB 2019 attracts top international scientists and key decision makers in the life sciences – experts in areas such as computer science, molecular biology and medicine, mathematics and statistics – from the world's largest and most prestigious research institutions and companies.

ISMB/ECCB 2019 is expected to attract scientific leaders from over 50 countries – that’s 50 markets!

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GLBIO 2019
Call for Full Paper Submissions!

	FEBRUARY 2019
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Be a part of this engaging conference
- Submit your research today!

Full Paper Submission Deadline:
February 11, 2019

Submit high quality original research papers for presentation on topics of interest, including the following:

• Algorithms & Machine Learning
• Bioinformatics Education
• Biostatistics
• Cheminformatics
• Clinical & Health Informatics
• Databases, Ontologies & Biocuration
• Disease Models & Molecular Medicine
• Epidemiology & Biodiversity
• Evolutionary, Comparative Genomics & Phylogenetics
• Gene Regulation & Transcriptomics
• Genome Informatics
• Image Analysis
• Macromolecular Structure & Function
• Metagenomics
• Microbiome Informatics
• Network Biology
• Proteomics & Metabolomics
• Sequence Analysis
• Synthetic Biology
• Systems Modeling
• Text Mining & Natural Language Processing
• Visualization

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